Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.21■□□□□ 0.35
ClppO88696 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ClppO88696 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClppO88696 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ClppO88696 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.21■□□□□ 0.35
ClppO88696 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
ClppO88696 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ClppO88696 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ClppO88696 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
ClppO88696 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ClppO88696 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.21■□□□□ 0.34
ClppO88696 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.2■□□□□ 0.34
ClppO88696 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.2■□□□□ 0.34
ClppO88696 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
ClppO88696 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ClppO88696 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ClppO88696 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ClppO88696 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.19■□□□□ 0.34
ClppO88696 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ClppO88696 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Gm38285-201ENSMUST00000192928 922 ntBASIC17.19■□□□□ 0.34
ClppO88696 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
ClppO88696 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.19■□□□□ 0.34
ClppO88696 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.18■□□□□ 0.34
ClppO88696 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.18■□□□□ 0.34
ClppO88696 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.18■□□□□ 0.34
ClppO88696 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ClppO88696 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ClppO88696 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.17■□□□□ 0.34
ClppO88696 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.17■□□□□ 0.34
ClppO88696 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.17■□□□□ 0.34
ClppO88696 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ClppO88696 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ClppO88696 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ClppO88696 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.16■□□□□ 0.34
ClppO88696 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.16■□□□□ 0.34
ClppO88696 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.16■□□□□ 0.34
ClppO88696 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.16■□□□□ 0.34
ClppO88696 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ClppO88696 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ClppO88696 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ClppO88696 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.16■□□□□ 0.34
ClppO88696 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClppO88696 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClppO88696 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ClppO88696 Gm37055-201ENSMUST00000191866 133 ntBASIC17.15■□□□□ 0.34
ClppO88696 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms