Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Gm6443-201ENSMUST00000203599 874 ntBASIC19.34■□□□□ 0.69
Slc6a20bO88575 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.34■□□□□ 0.69
Slc6a20bO88575 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.34■□□□□ 0.69
Slc6a20bO88575 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Slc6a20bO88575 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.33■□□□□ 0.69
Slc6a20bO88575 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Slc6a20bO88575 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.33■□□□□ 0.68
Slc6a20bO88575 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.33■□□□□ 0.68
Slc6a20bO88575 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a20bO88575 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Slc6a20bO88575 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Slc6a20bO88575 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a20bO88575 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc6a20bO88575 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20bO88575 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20bO88575 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20bO88575 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20bO88575 Gm13401-201ENSMUST00000117074 291 ntBASIC19.32■□□□□ 0.68
Slc6a20bO88575 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.32■□□□□ 0.68
Slc6a20bO88575 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.32■□□□□ 0.68
Slc6a20bO88575 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Slc6a20bO88575 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.32■□□□□ 0.68
Slc6a20bO88575 Gm34391-201ENSMUST00000203706 907 ntBASIC19.32■□□□□ 0.68
Slc6a20bO88575 Gm10566-201ENSMUST00000086739 996 ntBASIC19.32■□□□□ 0.68
Slc6a20bO88575 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20bO88575 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20bO88575 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc6a20bO88575 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a20bO88575 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.31■□□□□ 0.68
Slc6a20bO88575 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a20bO88575 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.31■□□□□ 0.68
Slc6a20bO88575 Gm26039-201ENSMUST00000158152 144 ntBASIC19.31■□□□□ 0.68
Slc6a20bO88575 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a20bO88575 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a20bO88575 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.31■□□□□ 0.68
Slc6a20bO88575 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a20bO88575 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc6a20bO88575 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20bO88575 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20bO88575 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20bO88575 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20bO88575 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20bO88575 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20bO88575 Il3ra-202ENSMUST00000223589 738 ntBASIC19.3■□□□□ 0.68
Slc6a20bO88575 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20bO88575 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20bO88575 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc6a20bO88575 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Slc6a20bO88575 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.29■□□□□ 0.68
Slc6a20bO88575 Gm6623-201ENSMUST00000173570 544 ntBASIC19.29■□□□□ 0.68
Slc6a20bO88575 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Gm9731-201ENSMUST00000209480 747 ntBASIC19.29■□□□□ 0.68
Slc6a20bO88575 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc6a20bO88575 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Slc6a20bO88575 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.28■□□□□ 0.68
Slc6a20bO88575 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc6a20bO88575 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20bO88575 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20bO88575 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20bO88575 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20bO88575 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.27■□□□□ 0.68
Slc6a20bO88575 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Slc6a20bO88575 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20bO88575 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20bO88575 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc6a20bO88575 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms