Protein–RNA interactions for Protein: O88507

Cntfr, Ciliary neurotrophic factor receptor subunit alpha, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CntfrO88507 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
CntfrO88507 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.31□□□□□ -0.12
CntfrO88507 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CntfrO88507 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CntfrO88507 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.3□□□□□ -0.12
CntfrO88507 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.3□□□□□ -0.12
CntfrO88507 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.3□□□□□ -0.12
CntfrO88507 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CntfrO88507 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CntfrO88507 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CntfrO88507 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Gm715-201ENSMUST00000117865 831 ntBASIC14.29□□□□□ -0.12
CntfrO88507 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.29□□□□□ -0.12
CntfrO88507 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.29□□□□□ -0.12
CntfrO88507 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.29□□□□□ -0.12
CntfrO88507 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.29□□□□□ -0.12
CntfrO88507 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CntfrO88507 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CntfrO88507 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CntfrO88507 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.28□□□□□ -0.12
CntfrO88507 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.28□□□□□ -0.12
CntfrO88507 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.28□□□□□ -0.12
CntfrO88507 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.28□□□□□ -0.12
CntfrO88507 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CntfrO88507 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.28□□□□□ -0.12
CntfrO88507 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Grk6-206ENSMUST00000224995 2971 ntBASIC14.28□□□□□ -0.12
CntfrO88507 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CntfrO88507 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CntfrO88507 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CntfrO88507 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CntfrO88507 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CntfrO88507 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CntfrO88507 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CntfrO88507 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CntfrO88507 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CntfrO88507 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms