Protein–RNA interactions for Protein: O70572

Smpd2, Sphingomyelin phosphodiesterase 2, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd2O70572 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smpd2O70572 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Smpd2O70572 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smpd2O70572 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smpd2O70572 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smpd2O70572 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Smpd2O70572 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Smpd2O70572 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.51■□□□□ 0.55
Smpd2O70572 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Smpd2O70572 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Gm11355-201ENSMUST00000121120 306 ntBASIC18.51■□□□□ 0.55
Smpd2O70572 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.51■□□□□ 0.55
Smpd2O70572 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.51■□□□□ 0.55
Smpd2O70572 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Smpd2O70572 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smpd2O70572 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smpd2O70572 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smpd2O70572 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smpd2O70572 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smpd2O70572 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smpd2O70572 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.5■□□□□ 0.55
Smpd2O70572 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smpd2O70572 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smpd2O70572 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Smpd2O70572 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smpd2O70572 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Smpd2O70572 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smpd2O70572 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Smpd2O70572 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.5■□□□□ 0.55
Smpd2O70572 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smpd2O70572 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.49■□□□□ 0.55
Smpd2O70572 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smpd2O70572 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Smpd2O70572 Mir3081-201ENSMUST00000175305 84 ntBASIC18.49■□□□□ 0.55
Smpd2O70572 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.49■□□□□ 0.55
Smpd2O70572 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smpd2O70572 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smpd2O70572 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Smpd2O70572 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smpd2O70572 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Smpd2O70572 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smpd2O70572 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smpd2O70572 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smpd2O70572 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Smpd2O70572 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smpd2O70572 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smpd2O70572 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Smpd2O70572 Gm13401-201ENSMUST00000117074 291 ntBASIC18.48■□□□□ 0.55
Smpd2O70572 Gm11950-201ENSMUST00000121615 838 ntBASIC18.48■□□□□ 0.55
Smpd2O70572 Gm18958-201ENSMUST00000174258 762 ntBASIC18.48■□□□□ 0.55
Smpd2O70572 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Smpd2O70572 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smpd2O70572 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smpd2O70572 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Smpd2O70572 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smpd2O70572 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Smpd2O70572 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Smpd2O70572 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Smpd2O70572 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smpd2O70572 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smpd2O70572 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smpd2O70572 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smpd2O70572 Gm10418-201ENSMUST00000100943 576 ntBASIC18.47■□□□□ 0.55
Smpd2O70572 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Smpd2O70572 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smpd2O70572 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.47■□□□□ 0.55
Smpd2O70572 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.47■□□□□ 0.55
Smpd2O70572 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.47■□□□□ 0.55
Smpd2O70572 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Smpd2O70572 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smpd2O70572 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smpd2O70572 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smpd2O70572 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Smpd2O70572 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smpd2O70572 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smpd2O70572 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Smpd2O70572 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smpd2O70572 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smpd2O70572 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smpd2O70572 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.46■□□□□ 0.55
Smpd2O70572 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smpd2O70572 Gm9731-201ENSMUST00000209480 747 ntBASIC18.46■□□□□ 0.55
Smpd2O70572 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smpd2O70572 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smpd2O70572 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Smpd2O70572 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Smpd2O70572 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms