Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr1O70481 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr1O70481 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC23.11■■□□□ 1.29
Ubr1O70481 Gm29518-201ENSMUST00000190858 372 ntBASIC23.11■■□□□ 1.29
Ubr1O70481 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr1O70481 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Ubr1O70481 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr1O70481 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr1O70481 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ubr1O70481 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr1O70481 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
Ubr1O70481 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr1O70481 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr1O70481 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC23.1■■□□□ 1.29
Ubr1O70481 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr1O70481 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr1O70481 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ubr1O70481 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
Ubr1O70481 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr1O70481 Gm14859-201ENSMUST00000117752 357 ntBASIC23.09■■□□□ 1.29
Ubr1O70481 Gm14464-201ENSMUST00000119658 1254 ntBASIC23.09■■□□□ 1.29
Ubr1O70481 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr1O70481 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr1O70481 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr1O70481 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC23.09■■□□□ 1.29
Ubr1O70481 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr1O70481 Gm8258-201ENSMUST00000055593 1449 ntBASIC23.09■■□□□ 1.29
Ubr1O70481 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
Ubr1O70481 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr1O70481 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr1O70481 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr1O70481 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Ubr1O70481 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubr1O70481 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC23.08■■□□□ 1.29
Ubr1O70481 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ubr1O70481 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ubr1O70481 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ubr1O70481 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC23.08■■□□□ 1.29
Ubr1O70481 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Ubr1O70481 Gm17808-201ENSMUST00000200859 894 ntBASIC23.08■■□□□ 1.29
Ubr1O70481 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ubr1O70481 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ubr1O70481 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ubr1O70481 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.07■■□□□ 1.28
Ubr1O70481 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Ubr1O70481 Actl10-202ENSMUST00000226583 1501 ntBASIC23.07■■□□□ 1.28
Ubr1O70481 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubr1O70481 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr1O70481 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr1O70481 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr1O70481 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC23.06■■□□□ 1.28
Ubr1O70481 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC23.06■■□□□ 1.28
Ubr1O70481 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr1O70481 Gm27389-201ENSMUST00000183622 195 ntBASIC23.06■■□□□ 1.28
Ubr1O70481 AC130713.1-201ENSMUST00000228853 1096 ntBASIC23.06■■□□□ 1.28
Ubr1O70481 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr1O70481 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr1O70481 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr1O70481 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr1O70481 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ubr1O70481 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC23.05■■□□□ 1.28
Ubr1O70481 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr1O70481 Gm11860-201ENSMUST00000122346 1010 ntBASIC23.05■■□□□ 1.28
Ubr1O70481 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr1O70481 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr1O70481 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC23.05■■□□□ 1.28
Ubr1O70481 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr1O70481 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr1O70481 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC23.05■■□□□ 1.28
Ubr1O70481 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ubr1O70481 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC23.04■■□□□ 1.28
Ubr1O70481 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC23.04■■□□□ 1.28
Ubr1O70481 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC23.04■■□□□ 1.28
Ubr1O70481 Gm28033-201ENSMUST00000184224 96 ntBASIC23.04■■□□□ 1.28
Ubr1O70481 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ubr1O70481 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms