Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pdlim1O70400 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pdlim1O70400 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim1O70400 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.46■□□□□ 0.39
Pdlim1O70400 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pdlim1O70400 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.45■□□□□ 0.38
Pdlim1O70400 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Pdlim1O70400 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Gm13401-201ENSMUST00000117074 291 ntBASIC17.45■□□□□ 0.38
Pdlim1O70400 Gm8969-201ENSMUST00000199694 526 ntBASIC17.45■□□□□ 0.38
Pdlim1O70400 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim1O70400 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Pdlim1O70400 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.44■□□□□ 0.38
Pdlim1O70400 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Pdlim1O70400 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.44■□□□□ 0.38
Pdlim1O70400 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.44■□□□□ 0.38
Pdlim1O70400 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.44■□□□□ 0.38
Pdlim1O70400 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pdlim1O70400 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.44■□□□□ 0.38
Pdlim1O70400 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Pdlim1O70400 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim1O70400 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pdlim1O70400 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Pdlim1O70400 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim1O70400 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim1O70400 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim1O70400 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.43■□□□□ 0.38
Pdlim1O70400 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.43■□□□□ 0.38
Pdlim1O70400 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pdlim1O70400 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.43■□□□□ 0.38
Pdlim1O70400 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim1O70400 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim1O70400 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim1O70400 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim1O70400 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim1O70400 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.43■□□□□ 0.38
Pdlim1O70400 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.42■□□□□ 0.38
Pdlim1O70400 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
Pdlim1O70400 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Mir1199-201ENSMUST00000117015 119 ntBASIC17.42■□□□□ 0.38
Pdlim1O70400 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.42■□□□□ 0.38
Pdlim1O70400 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
Pdlim1O70400 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Pdlim1O70400 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim1O70400 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Pdlim1O70400 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pdlim1O70400 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim1O70400 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pdlim1O70400 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim1O70400 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim1O70400 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim1O70400 Mir8112-201ENSMUST00000184382 131 ntBASIC17.41■□□□□ 0.38
Pdlim1O70400 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.41■□□□□ 0.38
Pdlim1O70400 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim1O70400 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim1O70400 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pdlim1O70400 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms