Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Iqck-206ENSMUST00000208658 2891 ntBASIC14.99□□□□□ -0.01
Cxcl13O55038 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cxcl13O55038 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.99□□□□□ -0.01
Cxcl13O55038 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.99□□□□□ -0.01
Cxcl13O55038 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.99□□□□□ -0.01
Cxcl13O55038 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.98□□□□□ -0.01
Cxcl13O55038 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Gm7889-201ENSMUST00000185591 958 ntBASIC14.98□□□□□ -0.01
Cxcl13O55038 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.98□□□□□ -0.01
Cxcl13O55038 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cxcl13O55038 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Cxcl13O55038 Fst-202ENSMUST00000223640 2612 ntBASIC14.98□□□□□ -0.01
Cxcl13O55038 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cxcl13O55038 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.97□□□□□ -0.01
Cxcl13O55038 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cxcl13O55038 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.97□□□□□ -0.01
Cxcl13O55038 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cxcl13O55038 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.97□□□□□ -0.01
Cxcl13O55038 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.97□□□□□ -0.01
Cxcl13O55038 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.97□□□□□ -0.01
Cxcl13O55038 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cxcl13O55038 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cxcl13O55038 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cxcl13O55038 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Cxcl13O55038 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.96□□□□□ -0.01
Cxcl13O55038 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.96□□□□□ -0.01
Cxcl13O55038 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Cxcl13O55038 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cxcl13O55038 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cxcl13O55038 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cxcl13O55038 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.96□□□□□ -0.02
Cxcl13O55038 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Cxcl13O55038 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Cxcl13O55038 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Cxcl13O55038 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
Cxcl13O55038 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.95□□□□□ -0.02
Cxcl13O55038 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.95□□□□□ -0.02
Cxcl13O55038 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cxcl13O55038 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms