Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Cacna1bO55017 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cacna1bO55017 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cacna1bO55017 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.05■□□□□ 0.32
Cacna1bO55017 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cacna1bO55017 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.04■□□□□ 0.32
Cacna1bO55017 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Cacna1bO55017 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1bO55017 Gm25925-201ENSMUST00000158314 306 ntBASIC17.04■□□□□ 0.32
Cacna1bO55017 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1bO55017 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.04■□□□□ 0.32
Cacna1bO55017 Gm4974-201ENSMUST00000209974 875 ntBASIC17.04■□□□□ 0.32
Cacna1bO55017 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cacna1bO55017 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1bO55017 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1bO55017 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1bO55017 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1bO55017 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1bO55017 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.04■□□□□ 0.32
Cacna1bO55017 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1bO55017 Gm18115-201ENSMUST00000221209 621 ntBASIC17.04■□□□□ 0.32
Cacna1bO55017 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cacna1bO55017 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.04■□□□□ 0.32
Cacna1bO55017 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cacna1bO55017 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cacna1bO55017 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.03■□□□□ 0.32
Cacna1bO55017 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1bO55017 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cacna1bO55017 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1bO55017 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cacna1bO55017 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1bO55017 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1bO55017 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1bO55017 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1bO55017 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1bO55017 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1bO55017 Gm27389-201ENSMUST00000183622 195 ntBASIC17.03■□□□□ 0.32
Cacna1bO55017 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.03■□□□□ 0.32
Cacna1bO55017 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1bO55017 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cacna1bO55017 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1bO55017 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1bO55017 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1bO55017 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cacna1bO55017 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1bO55017 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1bO55017 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1bO55017 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.02■□□□□ 0.32
Cacna1bO55017 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.02■□□□□ 0.32
Cacna1bO55017 Mzt1-203ENSMUST00000227948 952 ntBASIC17.02■□□□□ 0.32
Cacna1bO55017 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1bO55017 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cacna1bO55017 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Cacna1bO55017 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1bO55017 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1bO55017 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cacna1bO55017 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Cacna1bO55017 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cacna1bO55017 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Cacna1bO55017 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.01■□□□□ 0.31
Cacna1bO55017 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.01■□□□□ 0.31
Cacna1bO55017 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.01■□□□□ 0.31
Cacna1bO55017 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cacna1bO55017 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.01■□□□□ 0.31
Cacna1bO55017 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cacna1bO55017 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cacna1bO55017 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cacna1bO55017 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cacna1bO55017 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms