Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarce1O54941 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarce1O54941 Gm43808-201ENSMUST00000202534 2065 ntBASIC21.05■□□□□ 0.96
Smarce1O54941 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarce1O54941 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarce1O54941 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smarce1O54941 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarce1O54941 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Smarce1O54941 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarce1O54941 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarce1O54941 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarce1O54941 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarce1O54941 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarce1O54941 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarce1O54941 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.04■□□□□ 0.96
Smarce1O54941 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.04■□□□□ 0.96
Smarce1O54941 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.04■□□□□ 0.96
Smarce1O54941 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Smarce1O54941 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.04■□□□□ 0.96
Smarce1O54941 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smarce1O54941 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarce1O54941 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smarce1O54941 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Smarce1O54941 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.03■□□□□ 0.96
Smarce1O54941 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Smarce1O54941 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.03■□□□□ 0.96
Smarce1O54941 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smarce1O54941 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarce1O54941 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smarce1O54941 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Smarce1O54941 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.03■□□□□ 0.96
Smarce1O54941 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Smarce1O54941 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.02■□□□□ 0.96
Smarce1O54941 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarce1O54941 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarce1O54941 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarce1O54941 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarce1O54941 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.02■□□□□ 0.96
Smarce1O54941 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smarce1O54941 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Smarce1O54941 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarce1O54941 Gm6365-201ENSMUST00000054711 744 ntBASIC21.02■□□□□ 0.96
Smarce1O54941 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC21.02■□□□□ 0.96
Smarce1O54941 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarce1O54941 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smarce1O54941 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Smarce1O54941 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smarce1O54941 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smarce1O54941 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smarce1O54941 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Smarce1O54941 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.01■□□□□ 0.95
Smarce1O54941 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.01■□□□□ 0.95
Smarce1O54941 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarce1O54941 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarce1O54941 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarce1O54941 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarce1O54941 Gm7290-201ENSMUST00000104990 617 ntBASIC21.01■□□□□ 0.95
Smarce1O54941 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Smarce1O54941 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Smarce1O54941 Gm12918-201ENSMUST00000120234 636 ntBASIC21.01■□□□□ 0.95
Smarce1O54941 Gm15710-201ENSMUST00000121821 636 ntBASIC21.01■□□□□ 0.95
Smarce1O54941 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.01■□□□□ 0.95
Smarce1O54941 Gm5075-201ENSMUST00000196916 622 ntBASIC21.01■□□□□ 0.95
Smarce1O54941 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarce1O54941 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.01■□□□□ 0.95
Smarce1O54941 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.01■□□□□ 0.95
Smarce1O54941 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarce1O54941 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Smarce1O54941 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarce1O54941 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smarce1O54941 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Smarce1O54941 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smarce1O54941 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smarce1O54941 Gm38285-201ENSMUST00000192928 922 ntBASIC21■□□□□ 0.95
Smarce1O54941 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Smarce1O54941 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Smarce1O54941 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC21■□□□□ 0.95
Smarce1O54941 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Smarce1O54941 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Smarce1O54941 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Smarce1O54941 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarce1O54941 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarce1O54941 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarce1O54941 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarce1O54941 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smarce1O54941 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Smarce1O54941 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smarce1O54941 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms