Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ChkaO54804 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ChkaO54804 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ChkaO54804 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ChkaO54804 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.87■□□□□ 0.45
ChkaO54804 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.87■□□□□ 0.45
ChkaO54804 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.87■□□□□ 0.45
ChkaO54804 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.87■□□□□ 0.45
ChkaO54804 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ChkaO54804 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.87■□□□□ 0.45
ChkaO54804 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ChkaO54804 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
ChkaO54804 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ChkaO54804 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
ChkaO54804 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
ChkaO54804 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.86■□□□□ 0.45
ChkaO54804 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
ChkaO54804 Zfp783-201ENSMUST00000095946 670 ntBASIC17.86■□□□□ 0.45
ChkaO54804 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.86■□□□□ 0.45
ChkaO54804 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.86■□□□□ 0.45
ChkaO54804 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ChkaO54804 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChkaO54804 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ChkaO54804 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
ChkaO54804 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChkaO54804 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChkaO54804 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ChkaO54804 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.85■□□□□ 0.45
ChkaO54804 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ChkaO54804 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
ChkaO54804 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChkaO54804 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ChkaO54804 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.85■□□□□ 0.45
ChkaO54804 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ChkaO54804 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.85■□□□□ 0.45
ChkaO54804 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
ChkaO54804 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChkaO54804 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChkaO54804 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChkaO54804 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ChkaO54804 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChkaO54804 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.84■□□□□ 0.45
ChkaO54804 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChkaO54804 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.84■□□□□ 0.45
ChkaO54804 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChkaO54804 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ChkaO54804 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.84■□□□□ 0.45
ChkaO54804 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.84■□□□□ 0.45
ChkaO54804 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChkaO54804 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ChkaO54804 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ChkaO54804 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChkaO54804 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.84■□□□□ 0.45
ChkaO54804 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChkaO54804 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ChkaO54804 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.84■□□□□ 0.45
ChkaO54804 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ChkaO54804 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ChkaO54804 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
ChkaO54804 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.83■□□□□ 0.44
ChkaO54804 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.83■□□□□ 0.44
ChkaO54804 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
ChkaO54804 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.83■□□□□ 0.44
ChkaO54804 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ChkaO54804 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.82■□□□□ 0.44
ChkaO54804 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms