Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccr6O54689 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccr6O54689 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ccr6O54689 Gm38205-201ENSMUST00000192243 258 ntBASIC14.88□□□□□ -0.03
Ccr6O54689 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccr6O54689 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccr6O54689 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ccr6O54689 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccr6O54689 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Ccr6O54689 Gm12251-201ENSMUST00000117893 792 ntBASIC14.87□□□□□ -0.03
Ccr6O54689 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.87□□□□□ -0.03
Ccr6O54689 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccr6O54689 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccr6O54689 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccr6O54689 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccr6O54689 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.86□□□□□ -0.03
Ccr6O54689 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Gm12922-201ENSMUST00000120626 809 ntBASIC14.86□□□□□ -0.03
Ccr6O54689 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccr6O54689 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.86□□□□□ -0.03
Ccr6O54689 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ccr6O54689 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Gm9959-201ENSMUST00000068277 390 ntBASIC14.86□□□□□ -0.03
Ccr6O54689 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ccr6O54689 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Ccr6O54689 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.86□□□□□ -0.03
Ccr6O54689 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccr6O54689 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccr6O54689 Gm22325-201ENSMUST00000158904 308 ntBASIC14.85□□□□□ -0.03
Ccr6O54689 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccr6O54689 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ccr6O54689 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ccr6O54689 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccr6O54689 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccr6O54689 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.85□□□□□ -0.03
Ccr6O54689 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccr6O54689 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccr6O54689 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ccr6O54689 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.84□□□□□ -0.03
Ccr6O54689 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.84□□□□□ -0.03
Ccr6O54689 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccr6O54689 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccr6O54689 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms