Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.29■□□□□ 0.84
Stag2O35638 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag2O35638 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.29■□□□□ 0.84
Stag2O35638 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Stag2O35638 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag2O35638 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Stag2O35638 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.29■□□□□ 0.84
Stag2O35638 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Stag2O35638 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Gm21814-202ENSMUST00000203277 873 ntBASIC20.28■□□□□ 0.84
Stag2O35638 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Stag2O35638 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag2O35638 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.27■□□□□ 0.84
Stag2O35638 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.27■□□□□ 0.84
Stag2O35638 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag2O35638 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag2O35638 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Stag2O35638 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Stag2O35638 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
Stag2O35638 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Stag2O35638 Gm10418-201ENSMUST00000100943 576 ntBASIC20.27■□□□□ 0.84
Stag2O35638 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag2O35638 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.27■□□□□ 0.84
Stag2O35638 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.27■□□□□ 0.84
Stag2O35638 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.27■□□□□ 0.84
Stag2O35638 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.27■□□□□ 0.84
Stag2O35638 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag2O35638 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Stag2O35638 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Stag2O35638 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stag2O35638 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stag2O35638 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag2O35638 Gm5417-201ENSMUST00000079706 384 ntBASIC20.26■□□□□ 0.83
Stag2O35638 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag2O35638 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag2O35638 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag2O35638 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Stag2O35638 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Stag2O35638 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.25■□□□□ 0.83
Stag2O35638 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.25■□□□□ 0.83
Stag2O35638 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Stag2O35638 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Stag2O35638 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Stag2O35638 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stag2O35638 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stag2O35638 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stag2O35638 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stag2O35638 Gm15565-201ENSMUST00000118890 427 ntBASIC20.24■□□□□ 0.83
Stag2O35638 Gm12085-201ENSMUST00000119263 940 ntBASIC20.24■□□□□ 0.83
Stag2O35638 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Stag2O35638 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.24■□□□□ 0.83
Stag2O35638 Gm4974-201ENSMUST00000209974 875 ntBASIC20.24■□□□□ 0.83
Stag2O35638 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stag2O35638 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Stag2O35638 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stag2O35638 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag2O35638 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag2O35638 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stag2O35638 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Stag2O35638 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.23■□□□□ 0.83
Stag2O35638 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Stag2O35638 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.23■□□□□ 0.83
Stag2O35638 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag2O35638 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Stag2O35638 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Stag2O35638 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Stag2O35638 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Stag2O35638 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag2O35638 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag2O35638 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag2O35638 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag2O35638 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag2O35638 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag2O35638 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.22■□□□□ 0.83
Stag2O35638 Gm3375-201ENSMUST00000203929 796 ntBASIC20.22■□□□□ 0.83
Stag2O35638 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.22■□□□□ 0.83
Stag2O35638 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Stag2O35638 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms