Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk4O35493 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Clk4O35493 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.98■□□□□ 0.31
Clk4O35493 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk4O35493 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk4O35493 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Clk4O35493 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Trmt13-210ENSMUST00000198454 880 ntBASIC16.97■□□□□ 0.31
Clk4O35493 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.97■□□□□ 0.31
Clk4O35493 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.97■□□□□ 0.31
Clk4O35493 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Clk4O35493 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Clk4O35493 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clk4O35493 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clk4O35493 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Clk4O35493 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clk4O35493 Gm18666-201ENSMUST00000190039 958 ntBASIC16.96■□□□□ 0.31
Clk4O35493 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Clk4O35493 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Clk4O35493 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clk4O35493 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clk4O35493 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clk4O35493 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.96■□□□□ 0.3
Clk4O35493 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.96■□□□□ 0.3
Clk4O35493 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Clk4O35493 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.95■□□□□ 0.3
Clk4O35493 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.95■□□□□ 0.3
Clk4O35493 Gm11249-201ENSMUST00000117071 859 ntBASIC16.95■□□□□ 0.3
Clk4O35493 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.95■□□□□ 0.3
Clk4O35493 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.95■□□□□ 0.3
Clk4O35493 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Clk4O35493 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.95■□□□□ 0.3
Clk4O35493 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Clk4O35493 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.94■□□□□ 0.3
Clk4O35493 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Gm13158-201ENSMUST00000122007 736 ntBASIC16.94■□□□□ 0.3
Clk4O35493 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Gm8520-201ENSMUST00000186517 868 ntBASIC16.94■□□□□ 0.3
Clk4O35493 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Clk4O35493 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clk4O35493 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Clk4O35493 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk4O35493 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk4O35493 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.93■□□□□ 0.3
Clk4O35493 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk4O35493 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clk4O35493 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.93■□□□□ 0.3
Clk4O35493 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk4O35493 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk4O35493 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk4O35493 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.93■□□□□ 0.3
Clk4O35493 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.93■□□□□ 0.3
Clk4O35493 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk4O35493 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk4O35493 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.93■□□□□ 0.3
Clk4O35493 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clk4O35493 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.92■□□□□ 0.3
Clk4O35493 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.92■□□□□ 0.3
Clk4O35493 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clk4O35493 Gm10653-202ENSMUST00000139570 835 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms