Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clk2O35491 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clk2O35491 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Clk2O35491 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clk2O35491 Idnk-204ENSMUST00000226010 1898 ntBASIC19.28■□□□□ 0.68
Clk2O35491 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Clk2O35491 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.28■□□□□ 0.68
Clk2O35491 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk2O35491 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clk2O35491 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk2O35491 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk2O35491 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk2O35491 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk2O35491 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk2O35491 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk2O35491 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk2O35491 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clk2O35491 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Clk2O35491 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Clk2O35491 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 Gm24841-201ENSMUST00000158676 357 ntBASIC19.27■□□□□ 0.68
Clk2O35491 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.27■□□□□ 0.68
Clk2O35491 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Clk2O35491 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.27■□□□□ 0.68
Clk2O35491 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clk2O35491 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clk2O35491 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clk2O35491 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clk2O35491 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clk2O35491 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Gm7977-201ENSMUST00000193787 748 ntBASIC19.26■□□□□ 0.67
Clk2O35491 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.26■□□□□ 0.67
Clk2O35491 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clk2O35491 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Gm10231-201ENSMUST00000181584 441 ntBASIC19.25■□□□□ 0.67
Clk2O35491 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.25■□□□□ 0.67
Clk2O35491 Gm10175-202ENSMUST00000208752 441 ntBASIC19.25■□□□□ 0.67
Clk2O35491 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clk2O35491 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clk2O35491 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clk2O35491 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clk2O35491 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clk2O35491 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clk2O35491 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Clk2O35491 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clk2O35491 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clk2O35491 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clk2O35491 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clk2O35491 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clk2O35491 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clk2O35491 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clk2O35491 Gm7889-201ENSMUST00000185591 958 ntBASIC19.23■□□□□ 0.67
Clk2O35491 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Clk2O35491 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.23■□□□□ 0.67
Clk2O35491 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.23■□□□□ 0.67
Clk2O35491 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms