Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.26□□□□□ -0.61
Pkd1O08852 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.26□□□□□ -0.61
Pkd1O08852 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Gm43545-201ENSMUST00000196765 2779 ntBASIC11.26□□□□□ -0.61
Pkd1O08852 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pkd1O08852 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Pkd1O08852 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Pkd1O08852 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.26□□□□□ -0.61
Pkd1O08852 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.26□□□□□ -0.61
Pkd1O08852 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Pkd1O08852 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pkd1O08852 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pkd1O08852 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.25□□□□□ -0.61
Pkd1O08852 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pkd1O08852 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pkd1O08852 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Pkd1O08852 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pkd1O08852 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.25□□□□□ -0.61
Pkd1O08852 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pkd1O08852 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pkd1O08852 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pkd1O08852 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.25□□□□□ -0.61
Pkd1O08852 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.25□□□□□ -0.61
Pkd1O08852 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pkd1O08852 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pkd1O08852 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.24□□□□□ -0.61
Pkd1O08852 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pkd1O08852 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pkd1O08852 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pkd1O08852 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Pkd1O08852 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Pkd1O08852 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Gm11355-201ENSMUST00000121120 306 ntBASIC11.24□□□□□ -0.61
Pkd1O08852 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.24□□□□□ -0.61
Pkd1O08852 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pkd1O08852 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pkd1O08852 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pkd1O08852 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pkd1O08852 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Pkd1O08852 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC11.23□□□□□ -0.61
Pkd1O08852 Gm11594-201ENSMUST00000122313 162 ntBASIC11.23□□□□□ -0.61
Pkd1O08852 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.23□□□□□ -0.61
Pkd1O08852 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.23□□□□□ -0.61
Pkd1O08852 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pkd1O08852 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC11.22□□□□□ -0.61
Pkd1O08852 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Pkd1O08852 AC121961.1-201ENSMUST00000218594 1779 ntBASIC11.22□□□□□ -0.61
Pkd1O08852 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.22□□□□□ -0.61
Pkd1O08852 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.22□□□□□ -0.61
Pkd1O08852 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.22□□□□□ -0.61
Pkd1O08852 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Pkd1O08852 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.22□□□□□ -0.61
Pkd1O08852 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.22□□□□□ -0.61
Pkd1O08852 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms