Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf3O08791 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf3O08791 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ebf3O08791 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf3O08791 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.36■□□□□ 0.53
Ebf3O08791 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ebf3O08791 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.36■□□□□ 0.53
Ebf3O08791 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf3O08791 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf3O08791 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf3O08791 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf3O08791 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf3O08791 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf3O08791 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ebf3O08791 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.35■□□□□ 0.53
Ebf3O08791 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.35■□□□□ 0.53
Ebf3O08791 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ebf3O08791 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ebf3O08791 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ebf3O08791 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Ebf3O08791 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ebf3O08791 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ebf3O08791 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf3O08791 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf3O08791 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.34■□□□□ 0.53
Ebf3O08791 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.34■□□□□ 0.53
Ebf3O08791 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf3O08791 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf3O08791 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf3O08791 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf3O08791 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf3O08791 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf3O08791 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf3O08791 Gm3375-201ENSMUST00000203929 796 ntBASIC18.34■□□□□ 0.53
Ebf3O08791 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.34■□□□□ 0.53
Ebf3O08791 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ebf3O08791 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ebf3O08791 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.34■□□□□ 0.53
Ebf3O08791 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ebf3O08791 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ebf3O08791 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ebf3O08791 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ebf3O08791 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ebf3O08791 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ebf3O08791 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf3O08791 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Ebf3O08791 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.33■□□□□ 0.52
Ebf3O08791 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf3O08791 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.33■□□□□ 0.52
Ebf3O08791 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Ebf3O08791 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf3O08791 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf3O08791 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf3O08791 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf3O08791 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ebf3O08791 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf3O08791 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf3O08791 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf3O08791 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf3O08791 Gm7889-201ENSMUST00000185591 958 ntBASIC18.32■□□□□ 0.52
Ebf3O08791 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ebf3O08791 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.32■□□□□ 0.52
Ebf3O08791 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Ebf3O08791 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf3O08791 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf3O08791 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf3O08791 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf3O08791 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf3O08791 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ebf3O08791 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ebf3O08791 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ebf3O08791 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ebf3O08791 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf3O08791 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf3O08791 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ebf3O08791 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf3O08791 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf3O08791 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.31■□□□□ 0.52
Ebf3O08791 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.31■□□□□ 0.52
Ebf3O08791 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf3O08791 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf3O08791 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf3O08791 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf3O08791 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf3O08791 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ebf3O08791 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Ebf3O08791 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ebf3O08791 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms