Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tcof1O08784 Gm37055-201ENSMUST00000191866 133 ntBASIC20.73■□□□□ 0.91
Tcof1O08784 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcof1O08784 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tcof1O08784 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tcof1O08784 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tcof1O08784 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.72■□□□□ 0.91
Tcof1O08784 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Tcof1O08784 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tcof1O08784 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.72■□□□□ 0.91
Tcof1O08784 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tcof1O08784 Gm13401-201ENSMUST00000117074 291 ntBASIC20.72■□□□□ 0.91
Tcof1O08784 Gm15565-201ENSMUST00000118890 427 ntBASIC20.72■□□□□ 0.91
Tcof1O08784 Gm11643-201ENSMUST00000119578 864 ntBASIC20.72■□□□□ 0.91
Tcof1O08784 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tcof1O08784 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.72■□□□□ 0.91
Tcof1O08784 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Tcof1O08784 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tcof1O08784 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tcof1O08784 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tcof1O08784 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tcof1O08784 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.71■□□□□ 0.91
Tcof1O08784 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.71■□□□□ 0.91
Tcof1O08784 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.71■□□□□ 0.91
Tcof1O08784 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tcof1O08784 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tcof1O08784 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tcof1O08784 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tcof1O08784 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tcof1O08784 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tcof1O08784 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tcof1O08784 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tcof1O08784 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.7■□□□□ 0.9
Tcof1O08784 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
Tcof1O08784 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tcof1O08784 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.69■□□□□ 0.9
Tcof1O08784 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tcof1O08784 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tcof1O08784 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Tcof1O08784 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tcof1O08784 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tcof1O08784 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tcof1O08784 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tcof1O08784 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tcof1O08784 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tcof1O08784 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tcof1O08784 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tcof1O08784 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tcof1O08784 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tcof1O08784 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.67■□□□□ 0.9
Tcof1O08784 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tcof1O08784 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tcof1O08784 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tcof1O08784 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tcof1O08784 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tcof1O08784 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.67■□□□□ 0.9
Tcof1O08784 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tcof1O08784 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tcof1O08784 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tcof1O08784 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tcof1O08784 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms