Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim34bJ3QNR8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Gm24841-201ENSMUST00000158676 357 ntBASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Gm45058-201ENSMUST00000205810 766 ntBASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim34bJ3QNR8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Trim34bJ3QNR8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim34bJ3QNR8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim34bJ3QNR8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Trim34bJ3QNR8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim34bJ3QNR8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC21.64■■□□□ 1.06
Trim34bJ3QNR8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim34bJ3QNR8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34bJ3QNR8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.64■■□□□ 1.05
Trim34bJ3QNR8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34bJ3QNR8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34bJ3QNR8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trim34bJ3QNR8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34bJ3QNR8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim34bJ3QNR8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Gm6659-201ENSMUST00000174752 547 ntBASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Mir5130-201ENSMUST00000175160 84 ntBASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Trim34bJ3QNR8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trim34bJ3QNR8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Gm7638-201ENSMUST00000121348 967 ntBASIC21.61■■□□□ 1.05
Trim34bJ3QNR8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms