Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdh1F7BJK1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdh1F7BJK1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdh1F7BJK1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh1F7BJK1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh1F7BJK1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdh1F7BJK1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdh1F7BJK1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdh1F7BJK1 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdh1F7BJK1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdh1F7BJK1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Gm10493-201ENSMUST00000097270 612 ntBASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdh1F7BJK1 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms