Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atf6F6VAN0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Gm12896-201ENSMUST00000118430 226 ntBASIC18.17■□□□□ 0.5
Atf6F6VAN0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Mtag2-201ENSMUST00000058665 714 ntBASIC18.17■□□□□ 0.5
Atf6F6VAN0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atf6F6VAN0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.16■□□□□ 0.5
Atf6F6VAN0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.16■□□□□ 0.5
Atf6F6VAN0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Atf6F6VAN0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atf6F6VAN0 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Atf6F6VAN0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Atf6F6VAN0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.14■□□□□ 0.49
Atf6F6VAN0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atf6F6VAN0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.14■□□□□ 0.49
Atf6F6VAN0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atf6F6VAN0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atf6F6VAN0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Atf6F6VAN0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.14■□□□□ 0.49
Atf6F6VAN0 Dio3-201ENSMUST00000097228 1449 ntBASIC18.14■□□□□ 0.49
Atf6F6VAN0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atf6F6VAN0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atf6F6VAN0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf6F6VAN0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf6F6VAN0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Atf6F6VAN0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.13■□□□□ 0.49
Atf6F6VAN0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf6F6VAN0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf6F6VAN0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf6F6VAN0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf6F6VAN0 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atf6F6VAN0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms