Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Gm6376-201ENSMUST00000209407 580 ntBASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col6a3E9PWQ3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Gm9727-201ENSMUST00000161387 555 ntBASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Gm37722-201ENSMUST00000193757 208 ntBASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col6a3E9PWQ3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Col6a3E9PWQ3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a3E9PWQ3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a3E9PWQ3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a3E9PWQ3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a3E9PWQ3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a3E9PWQ3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.81■□□□□ 0.44
Col6a3E9PWQ3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a3E9PWQ3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col6a3E9PWQ3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a3E9PWQ3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Col6a3E9PWQ3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a3E9PWQ3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a3E9PWQ3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a3E9PWQ3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a3E9PWQ3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a3E9PWQ3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a3E9PWQ3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col6a3E9PWQ3 Gm43767-201ENSMUST00000198933 381 ntBASIC17.8■□□□□ 0.44
Col6a3E9PWQ3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col6a3E9PWQ3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col6a3E9PWQ3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col6a3E9PWQ3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col6a3E9PWQ3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Col6a3E9PWQ3 Gm12644-201ENSMUST00000119935 606 ntBASIC17.77■□□□□ 0.44
Col6a3E9PWQ3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
Col6a3E9PWQ3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col6a3E9PWQ3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col6a3E9PWQ3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col6a3E9PWQ3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Col6a3E9PWQ3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.77■□□□□ 0.43
Col6a3E9PWQ3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.77■□□□□ 0.43
Col6a3E9PWQ3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col6a3E9PWQ3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Col6a3E9PWQ3 Mir6956-201ENSMUST00000183598 62 ntBASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col6a3E9PWQ3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms