Protein–RNA interactions for Protein: E9PV98

Trim5, Tripartite motif-containing 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim5E9PV98 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim5E9PV98 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trim5E9PV98 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim5E9PV98 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim5E9PV98 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.85■□□□□ 0.77
Trim5E9PV98 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim5E9PV98 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim5E9PV98 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim5E9PV98 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trim5E9PV98 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim5E9PV98 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim5E9PV98 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.84■□□□□ 0.77
Trim5E9PV98 Gm13401-201ENSMUST00000117074 291 ntBASIC19.84■□□□□ 0.77
Trim5E9PV98 Gm17808-201ENSMUST00000200859 894 ntBASIC19.84■□□□□ 0.77
Trim5E9PV98 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim5E9PV98 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim5E9PV98 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim5E9PV98 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim5E9PV98 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim5E9PV98 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim5E9PV98 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim5E9PV98 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.84■□□□□ 0.77
Trim5E9PV98 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.84■□□□□ 0.77
Trim5E9PV98 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim5E9PV98 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim5E9PV98 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim5E9PV98 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim5E9PV98 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim5E9PV98 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim5E9PV98 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim5E9PV98 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim5E9PV98 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.83■□□□□ 0.76
Trim5E9PV98 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim5E9PV98 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim5E9PV98 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim5E9PV98 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim5E9PV98 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trim5E9PV98 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Trim5E9PV98 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim5E9PV98 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim5E9PV98 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.82■□□□□ 0.76
Trim5E9PV98 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Trim5E9PV98 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trim5E9PV98 Gm18669-201ENSMUST00000216049 778 ntBASIC19.82■□□□□ 0.76
Trim5E9PV98 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim5E9PV98 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim5E9PV98 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.82■□□□□ 0.76
Trim5E9PV98 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim5E9PV98 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.81■□□□□ 0.76
Trim5E9PV98 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Gm10418-201ENSMUST00000100943 576 ntBASIC19.81■□□□□ 0.76
Trim5E9PV98 Gm7213-201ENSMUST00000215977 950 ntBASIC19.81■□□□□ 0.76
Trim5E9PV98 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim5E9PV98 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Trim5E9PV98 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim5E9PV98 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim5E9PV98 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.8■□□□□ 0.76
Trim5E9PV98 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim5E9PV98 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.8■□□□□ 0.76
Trim5E9PV98 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim5E9PV98 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim5E9PV98 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim5E9PV98 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim5E9PV98 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim5E9PV98 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim5E9PV98 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim5E9PV98 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim5E9PV98 Gm7153-201ENSMUST00000117092 455 ntBASIC19.79■□□□□ 0.76
Trim5E9PV98 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trim5E9PV98 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim5E9PV98 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Trim5E9PV98 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim5E9PV98 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim5E9PV98 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim5E9PV98 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim5E9PV98 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trim5E9PV98 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim5E9PV98 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim5E9PV98 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.79■□□□□ 0.76
Trim5E9PV98 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim5E9PV98 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim5E9PV98 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim5E9PV98 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim5E9PV98 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms