Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm28043E0CXC2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm28043E0CXC2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm28043E0CXC2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Gm37179-201ENSMUST00000194862 823 ntBASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.73■□□□□ 0.43
Gm28043E0CXC2 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Gm28043E0CXC2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Gm28043E0CXC2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.71■□□□□ 0.43
Gm28043E0CXC2 Gm7290-201ENSMUST00000104990 617 ntBASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms