Protein–RNA interactions for Protein: D3Z5T1

Ccdc78, Coiled-coil domain-containing protein 78, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc78D3Z5T1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc78D3Z5T1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc78D3Z5T1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc78D3Z5T1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc78D3Z5T1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc78D3Z5T1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Ccdc78D3Z5T1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc78D3Z5T1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.83■□□□□ 0.77
Ccdc78D3Z5T1 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.83■□□□□ 0.77
Ccdc78D3Z5T1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc78D3Z5T1 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc78D3Z5T1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc78D3Z5T1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Gm11643-201ENSMUST00000119578 864 ntBASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Gm10517-202ENSMUST00000192970 758 ntBASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc78D3Z5T1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.8■□□□□ 0.76
Ccdc78D3Z5T1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Grk6-206ENSMUST00000224995 2971 ntBASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc78D3Z5T1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms