Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.94■□□□□ 0.62
Sh2d4bA6X942 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4bA6X942 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4bA6X942 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4bA6X942 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4bA6X942 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sh2d4bA6X942 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Sh2d4bA6X942 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.93■□□□□ 0.62
Sh2d4bA6X942 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Odf3b-204ENSMUST00000227834 930 ntBASIC18.93■□□□□ 0.62
Sh2d4bA6X942 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh2d4bA6X942 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh2d4bA6X942 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Gm11539-201ENSMUST00000119837 557 ntBASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Gm13436-201ENSMUST00000120418 567 ntBASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Gm27741-201ENSMUST00000185060 237 ntBASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sh2d4bA6X942 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh2d4bA6X942 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sh2d4bA6X942 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sh2d4bA6X942 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sh2d4bA6X942 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sh2d4bA6X942 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sh2d4bA6X942 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Sh2d4bA6X942 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sh2d4bA6X942 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Gm7889-201ENSMUST00000185591 958 ntBASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Gm10138-203ENSMUST00000206952 366 ntBASIC18.89■□□□□ 0.61
Sh2d4bA6X942 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms