Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt28A6BLY7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.65■□□□□ 0.74
Krt28A6BLY7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt28A6BLY7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt28A6BLY7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt28A6BLY7 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt28A6BLY7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Krt28A6BLY7 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.64■□□□□ 0.74
Krt28A6BLY7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Krt28A6BLY7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Krt28A6BLY7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.64■□□□□ 0.73
Krt28A6BLY7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt28A6BLY7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Krt28A6BLY7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt28A6BLY7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Krt28A6BLY7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Krt28A6BLY7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Krt28A6BLY7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.64■□□□□ 0.73
Krt28A6BLY7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Gm13401-201ENSMUST00000117074 291 ntBASIC19.63■□□□□ 0.73
Krt28A6BLY7 Gm45328-201ENSMUST00000210942 917 ntBASIC19.63■□□□□ 0.73
Krt28A6BLY7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Krt28A6BLY7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt28A6BLY7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Krt28A6BLY7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Gm34391-201ENSMUST00000203706 907 ntBASIC19.61■□□□□ 0.73
Krt28A6BLY7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Birc2-201ENSMUST00000054878 378 ntBASIC19.61■□□□□ 0.73
Krt28A6BLY7 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Krt28A6BLY7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Mir770-201ENSMUST00000103252 94 ntBASIC19.6■□□□□ 0.73
Krt28A6BLY7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Krt28A6BLY7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Krt28A6BLY7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt28A6BLY7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt28A6BLY7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Krt28A6BLY7 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Krt28A6BLY7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt28A6BLY7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Krt28A6BLY7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt28A6BLY7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt28A6BLY7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt28A6BLY7 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.59■□□□□ 0.73
Krt28A6BLY7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Krt28A6BLY7 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Krt28A6BLY7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Krt28A6BLY7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Krt28A6BLY7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Krt28A6BLY7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Krt28A6BLY7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Krt28A6BLY7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Krt28A6BLY7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Krt28A6BLY7 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms