Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.62■□□□□ 0.57
Scn1aA2APX8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Scn1aA2APX8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Gm30025-201ENSMUST00000218555 728 ntBASIC18.62■□□□□ 0.57
Scn1aA2APX8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scn1aA2APX8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Gm7889-201ENSMUST00000185591 958 ntBASIC18.61■□□□□ 0.57
Scn1aA2APX8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scn1aA2APX8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.61■□□□□ 0.57
Scn1aA2APX8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Mir8112-201ENSMUST00000184382 131 ntBASIC18.6■□□□□ 0.57
Scn1aA2APX8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scn1aA2APX8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Gm13559-201ENSMUST00000120476 863 ntBASIC18.59■□□□□ 0.57
Scn1aA2APX8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.59■□□□□ 0.57
Scn1aA2APX8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Gm6433-201ENSMUST00000118634 875 ntBASIC18.59■□□□□ 0.57
Scn1aA2APX8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scn1aA2APX8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn1aA2APX8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Scn1aA2APX8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn1aA2APX8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scn1aA2APX8 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Scn1aA2APX8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn1aA2APX8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn1aA2APX8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn1aA2APX8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn1aA2APX8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn1aA2APX8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn1aA2APX8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn1aA2APX8 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn1aA2APX8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Scn1aA2APX8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scn1aA2APX8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scn1aA2APX8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.56■□□□□ 0.56
Scn1aA2APX8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms