Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav12-1A0N8R1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav12-1A0N8R1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav12-1A0N8R1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav12-1A0N8R1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav12-1A0N8R1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Gm18671-201ENSMUST00000214826 683 ntBASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12-1A0N8R1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms