Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trbv29A0A0G2LB96 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv29A0A0G2LB96 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv29A0A0G2LB96 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv29A0A0G2LB96 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trbv29A0A0G2LB96 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Gm10493-201ENSMUST00000097270 612 ntBASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbv29A0A0G2LB96 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbv29A0A0G2LB96 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Trbv29A0A0G2LB96 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms