Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-4A0A0G2JFX3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav13d-4A0A0G2JFX3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13d-4A0A0G2JFX3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gm13146-201ENSMUST00000118508 780 ntBASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Trav13d-4A0A0G2JFX3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms