Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13n-1A0A0G2JEU8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm5643-201ENSMUST00000117081 966 ntBASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm13158-201ENSMUST00000122007 736 ntBASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm22325-201ENSMUST00000158904 308 ntBASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm45141-201ENSMUST00000206502 1888 ntBASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm11927-201ENSMUST00000118472 759 ntBASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Gm10252-201ENSMUST00000209541 832 ntBASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav13n-1A0A0G2JEU8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms