Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Igkv8-28A0A0G2JE47 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 AC121961.1-201ENSMUST00000218594 1779 ntBASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Haglr-201ENSMUST00000100000 2085 ntBASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Igkv8-28A0A0G2JE47 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Igkv8-28A0A0G2JE47 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Tgds-204ENSMUST00000228543 1594 ntBASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Igkv8-28A0A0G2JE47 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv8-28A0A0G2JE47 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Igkv8-28A0A0G2JE47 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms