Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav19A0A0B4J1K4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav19A0A0B4J1K4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav19A0A0B4J1K4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav19A0A0B4J1K4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav19A0A0B4J1K4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav19A0A0B4J1K4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Trav19A0A0B4J1K4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav19A0A0B4J1K4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav19A0A0B4J1K4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav19A0A0B4J1K4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Gm13146-201ENSMUST00000118508 780 ntBASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Gm22325-201ENSMUST00000158904 308 ntBASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Gm9988-201ENSMUST00000069786 435 ntBASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Trav19A0A0B4J1K4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Gm13534-201ENSMUST00000121169 513 ntBASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav19A0A0B4J1K4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav19A0A0B4J1K4 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav19A0A0B4J1K4 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms