Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav9-4A0A0B4J1K2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm27011-201ENSMUST00000182352 972 ntBASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav9-4A0A0B4J1K2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm13158-201ENSMUST00000122007 736 ntBASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav9-4A0A0B4J1K2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav9-4A0A0B4J1K2 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav9-4A0A0B4J1K2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm20760-201ENSMUST00000179197 648 ntBASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9-4A0A0B4J1K2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.26□□□□□ -0.29
Trav9-4A0A0B4J1K2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms