Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav11A0A0B4J1J9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Gm21956-201ENSMUST00000179946 522 ntBASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav11A0A0B4J1J9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Gm26833-201ENSMUST00000180899 440 ntBASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.18□□□□□ -0.46
Trav11A0A0B4J1J9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav11A0A0B4J1J9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trav11A0A0B4J1J9 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms