Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv20A0A0B4J1H5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
Trbv20A0A0B4J1H5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv20A0A0B4J1H5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv20A0A0B4J1H5 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Trbv20A0A0B4J1H5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv20A0A0B4J1H5 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trbv20A0A0B4J1H5 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.84■□□□□ 0.13
Trbv20A0A0B4J1H5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms