Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv19A0A0B4J1H4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Gm2399-201ENSMUST00000104944 225 ntBASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv19A0A0B4J1H4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv19A0A0B4J1H4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv19A0A0B4J1H4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv19A0A0B4J1H4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv19A0A0B4J1H4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv19A0A0B4J1H4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv19A0A0B4J1H4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv19A0A0B4J1H4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm38285-201ENSMUST00000192928 922 ntBASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv19A0A0B4J1H4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm44549-201ENSMUST00000208351 577 ntBASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv19A0A0B4J1H4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv19A0A0B4J1H4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms