Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv2A0A0B4J1G8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv2A0A0B4J1G8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv2A0A0B4J1G8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trbv2A0A0B4J1G8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv2A0A0B4J1G8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trbv2A0A0B4J1G8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv2A0A0B4J1G8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbv2A0A0B4J1G8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv2A0A0B4J1G8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv2A0A0B4J1G8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms