Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trbv3A0A0A6YYE2 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trbv3A0A0A6YYE2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Gm12251-201ENSMUST00000117893 792 ntBASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Gm38205-201ENSMUST00000192243 258 ntBASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trbv3A0A0A6YYE2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trbv3A0A0A6YYE2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm22325-201ENSMUST00000158904 308 ntBASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv3A0A0A6YYE2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv3A0A0A6YYE2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms