Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm5643-201ENSMUST00000117081 966 ntBASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbc1A0A0A6YWV4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbc1A0A0A6YWV4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbc1A0A0A6YWV4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbc1A0A0A6YWV4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm10138-203ENSMUST00000206952 366 ntBASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trbc1A0A0A6YWV4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 146.9 ms