Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv23A0A0A6YWQ1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm18284-201ENSMUST00000172604 624 ntBASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm42642-201ENSMUST00000200683 355 ntBASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trbv23A0A0A6YWQ1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm13234-201ENSMUST00000120010 747 ntBASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trbv23A0A0A6YWQ1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trbv23A0A0A6YWQ1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.21■□□□□ 0.02
Trbv23A0A0A6YWQ1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv23A0A0A6YWQ1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv23A0A0A6YWQ1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv23A0A0A6YWQ1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv23A0A0A6YWQ1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv23A0A0A6YWQ1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv23A0A0A6YWQ1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trbv23A0A0A6YWQ1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv23A0A0A6YWQ1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv23A0A0A6YWQ1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv23A0A0A6YWQ1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv23A0A0A6YWQ1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv23A0A0A6YWQ1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trbv23A0A0A6YWQ1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Trbv23A0A0A6YWQ1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.2■□□□□ 0.02
Trbv23A0A0A6YWQ1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.2■□□□□ 0.02
Trbv23A0A0A6YWQ1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbv23A0A0A6YWQ1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms