Protein–RNA interactions for Protein: A0A087WPA9

Scgb2b18, ABPBG18, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb2b18A0A087WPA9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scgb2b18A0A087WPA9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Gm29791-202ENSMUST00000207888 369 ntBASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scgb2b18A0A087WPA9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.28■□□□□ 0.68
Scgb2b18A0A087WPA9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 Mir2861-201ENSMUST00000175539 82 ntBASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scgb2b18A0A087WPA9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scgb2b18A0A087WPA9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scgb2b18A0A087WPA9 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scgb2b18A0A087WPA9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scgb2b18A0A087WPA9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scgb2b18A0A087WPA9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scgb2b18A0A087WPA9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scgb2b18A0A087WPA9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scgb2b18A0A087WPA9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scgb2b18A0A087WPA9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scgb2b18A0A087WPA9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scgb2b18A0A087WPA9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scgb2b18A0A087WPA9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scgb2b18A0A087WPA9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms