Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Gm13534-201ENSMUST00000121169 513 ntBASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6d-5A0A075B6B9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-5A0A075B6B9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-5A0A075B6B9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-5A0A075B6B9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-5A0A075B6B9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-5A0A075B6B9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6d-5A0A075B6B9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Trav6d-5A0A075B6B9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 Gm40848-201ENSMUST00000221998 324 ntBASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Trav6d-5A0A075B6B9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Gm26833-201ENSMUST00000180899 440 ntBASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6d-5A0A075B6B9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Gm13216-201ENSMUST00000117145 591 ntBASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6d-5A0A075B6B9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav6d-5A0A075B6B9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6d-5A0A075B6B9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms