Protein–RNA interactions for Protein: A0A075B6B1

Trav14d-1, T cell receptor alpha variable 14D-1 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14d-1A0A075B6B1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14d-1A0A075B6B1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14d-1A0A075B6B1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav14d-1A0A075B6B1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav14d-1A0A075B6B1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav14d-1A0A075B6B1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav14d-1A0A075B6B1 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav14d-1A0A075B6B1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav14d-1A0A075B6B1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trav14d-1A0A075B6B1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Smad6-203ENSMUST00000179458 273 ntBASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm38205-201ENSMUST00000192243 258 ntBASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14d-1A0A075B6B1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav14d-1A0A075B6B1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm43137-201ENSMUST00000198052 594 ntBASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav14d-1A0A075B6B1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav14d-1A0A075B6B1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms