Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav6d-7A0A075B6B0 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav6d-7A0A075B6B0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Gm6211-202ENSMUST00000167849 925 ntBASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Gm27011-201ENSMUST00000182352 972 ntBASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav6d-7A0A075B6B0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6d-7A0A075B6B0 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6d-7A0A075B6B0 Tgds-204ENSMUST00000228543 1594 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms