Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav17A0A075B655 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Gm13146-201ENSMUST00000118508 780 ntBASIC14.11□□□□□ -0.15
Trav17A0A075B655 Gm27454-201ENSMUST00000185090 204 ntBASIC14.11□□□□□ -0.15
Trav17A0A075B655 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Gm43017-201ENSMUST00000198296 752 ntBASIC14.11□□□□□ -0.15
Trav17A0A075B655 Gm43060-201ENSMUST00000200621 289 ntBASIC14.11□□□□□ -0.15
Trav17A0A075B655 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.11□□□□□ -0.15
Trav17A0A075B655 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.11□□□□□ -0.15
Trav17A0A075B655 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.11□□□□□ -0.15
Trav17A0A075B655 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav17A0A075B655 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav17A0A075B655 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Gm13534-201ENSMUST00000121169 513 ntBASIC14.09□□□□□ -0.15
Trav17A0A075B655 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Gm22325-201ENSMUST00000158904 308 ntBASIC14.09□□□□□ -0.15
Trav17A0A075B655 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav17A0A075B655 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Trav17A0A075B655 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav17A0A075B655 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav17A0A075B655 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Gm9988-201ENSMUST00000069786 435 ntBASIC14.08□□□□□ -0.16
Trav17A0A075B655 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav17A0A075B655 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav17A0A075B655 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav17A0A075B655 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms