Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Etf1-202ENSMUST00000180351 108 ntBASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-4A0A075B654 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav3-4A0A075B654 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-4A0A075B654 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-4A0A075B654 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Gm6085-201ENSMUST00000182774 1470 ntBASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-4A0A075B654 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms