Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Gm10849-201ENSMUST00000100397 618 ntBASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav5-4A0A075B652 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav5-4A0A075B652 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav5-4A0A075B652 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav5-4A0A075B652 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav5-4A0A075B652 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav5-4A0A075B652 Gm8495-201ENSMUST00000188740 694 ntBASIC14.77□□□□□ -0.05
Trav5-4A0A075B652 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav5-4A0A075B652 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav5-4A0A075B652 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav5-4A0A075B652 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav5-4A0A075B652 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav5-4A0A075B652 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav5-4A0A075B652 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Gm7291-201ENSMUST00000199147 382 ntBASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav5-4A0A075B652 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav5-4A0A075B652 Gm7290-201ENSMUST00000104990 617 ntBASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms