Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-2A0A075B638 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-2A0A075B638 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 AC093043.1-201ENSMUST00000226700 898 ntBASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-2A0A075B638 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav4-2A0A075B638 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trav4-2A0A075B638 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-2A0A075B638 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-2A0A075B638 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Trav4-2A0A075B638 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-2A0A075B638 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-2A0A075B638 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 Gm13216-201ENSMUST00000117145 591 ntBASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav4-2A0A075B638 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-2A0A075B638 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms