Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav8n-2A0A075B633 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Gm7284-201ENSMUST00000131667 944 ntBASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Gm7791-201ENSMUST00000219066 539 ntBASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav8n-2A0A075B633 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Ank2-226ENSMUST00000189368 339 ntBASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav8n-2A0A075B633 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Gm21559-201ENSMUST00000220638 855 ntBASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Gm8587-201ENSMUST00000076538 843 ntBASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.21■□□□□ 0.19
Trav8n-2A0A075B633 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav8n-2A0A075B633 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Gm17661-201ENSMUST00000170317 270 ntBASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav8n-2A0A075B633 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav8n-2A0A075B633 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.18■□□□□ 0.18
Trav8n-2A0A075B633 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms